Pan-Cancer data
Gene expression data from around 9000 samples correspond to 9 different human tumor types including Breast, Colon, Kidney, Liver, Lung, Ovary, Pancreatic, Prostate and Skin cancers were used in developing MALANI.
|
Tissue | Normal | Tumor | TOTAL (Normal%-Tumor%) |
|---|---|---|---|
| 1. Breast | 129 | 1984 | 2113 (6.1%-93.9%) |
| 2. Colon | 208 | 1557 | 1765 (11.7%-88.2%) |
| 3. Kidney | 442 | 589 | 1031 (42.8%-57.1%) |
| 4. Liver | 309 | 279 | 588 (52.5%-47.4%) |
| 5. Lung | 212 | 875 | 1087 (19.5%-80.4%) |
| 6. Ovary | 115 | 839 | 954 (12.0%-87.9%) |
| 7. Pancreas | 81 | 178 | 259 (31.2%-68.7%) |
| 8. Prostate | 90 | 299 | 389 (23.1%-76.8%) |
| 9. Skin | 264 | 357 | 621 (42.5%-57.5%) |
| TOTAL | 1850 | 6957 | 8807 (21%-79%) |
GEO accessions
A total of 6957 cancer and 1850 normal tissue arrays were collected from GEO database. The accession IDs and descriptions for each normal/cancer samples can be downloaded from following link.
